Publications on corpora for biomedical natural language processing

• Bies, A.; S. Kulick; and M. Mandel (2005) Parallel entity and treebank annotation.
• Blaschke, Christian; Miguel A. Andrade; Christos Ouzounis; and Alfonso Valencia (1999) Automatic extraction of biological information from scientific text: protein-protein interactions
• Cohen, K. Bretonnel; Lynne Fox; Philip V. Ogren; and Lawrence Hunter (2005) Empirical data on corpus design and usage in biomedical natural language processing
• Cohen, K. Bretonnel; Lynne Fox; Philip V. Ogren; and Lawrence Hunter (2005) Corpus design for biomedical natural language processing
• Craven, Mark; and J. Kumlein (1999) Constructing biological knowledge bases by extracting information from text sources
• GENIA publications
• Hersh, William; Chris Buckley; TJ Leone; and David Hickam (1994) OHSUMED: an interactive retrieval evaluation and new large test collection for research
• Kulick, S.; A. Bies; M. Liberman; M. Mandel; R. McDonald; M. Palmer; et al. (2004) Integrated annotation for biomedical information extraction
• Mani, Inderjeet; Zhangzhi Hu; Seok Bae Jang; Ken Samuel; Matthew Krause; Jon Phillips; and Cathy H. Wu (2005) Protein name tagging guidelines: lessons learned
• Medstract publications
• Pyysalo et al.'s preferred BioInfer citation
• Smith, Lawrence H.; Lorraine Tanabe; Thomas Rindflesch; and W. John Wilbur (2005) MedTag: a collection of biomedical annotations
• Rinaldo, Fabio; Gerold Schneider; Kaarel Kaljurand; Michael Hess; and Martin Romacker An environment for relation mining over richly annotated corpora: the case of GENIA
• Skounakis, M.; M. Craven; and S. Ray (2003) Hierarchical hidden Markov models for information extraction
• Yapex publications