Tools
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Gardy JL, Spencer C, Wang K, Ester M, Tusnady GE, Simon I,
Hua S, deFays K, Lambert C, Nakai K, Brinkman FS,
PSORT-B: Improving protein subcellular localization prediction for
Gram-negative bacteria,
Nucleic Acids Res. 2003 Jul 1; 31(13):3613-7
[Abstract]
Juncker AS, Willenbrock H, Von Heijne G, Brunak S,
Nielsen H, Krogh A,
Prediction of lipoprotein signal peptides in Gram-negative bacteria,
Protein Sci. 2003 Aug; 12(8):1652-62
[Abstract]
Yuan Z, Davis MJ, Zhang F, Teasdale RD,
Computational differentiation of N-terminal signal peptides and
transmembrane helices,
Biochem Biophys Res Commun. 2003 Dec 26;312(4):1278-83,
[Abstract]
Chen Y, Yu P, Luo J, Jiang Y,
Secreted protein prodiction system combining CJ-SPHMM, TMHMM, and PSORT,
Mamm Genome. 2003 Dec; 14(12):859-65
[Abstract]
Westerlund I, Von Heijne G, Emanuelsson O.,
LumenP--a neural network predictor for protein localization in the
thylakoid lumen,
Protein Sci. 2003 Oct;12(10):2360-6
[Abstract]
Park KJ, Kanehisa M,
Prediction of protein subcellular locations by support vector machines
using compositions of amino acids and amino acid pairs,
Bioinformatics. 2003 Sep 1; 19(13):1656-63
[Abstract]
Nair R, Rost B,
LOC3D: annotate sub-cellular localization for protein structures,
Nucleic Acids Res. 2003 Jul 1; 31(13):3337-40
[Abstract]
Melen K, Krogh A, von Heijne G.
Reliability measures for membrane protein topology prediction algorithms,J Mol Biol. 2003 Mar 28;327(3):735-44
[Abstract]
Liu Q, Zhu YS, Wang BH, Li YX.,
A HMM-based method to predict the transmembrane regions of beta-barrel
membrane proteins,
Comput Biol Chem. 2003 Feb;27(1):69-76
[Abstract]
Nair R, Carter P, Rost B.,
NLSdb: database of nuclear localization signals,
Nucleic Acids Res. 2003 Jan 1;31(1):397-9
[Abstract]
Huh WK, Falvo JV, Gerke LC, Carroll AS, Howson RW, Weissman JS, O'Shea EK.
Global analysis of protein localization in budding yeast,
Nature. 2003 Oct 16;425(6959):686-91.
[Abstract]
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