Daniel J. McGoldrick Ph.D.
Curriculum Vitae
Data Federation ProjectThe Art of Description (powerpoint)
Descriptron Handout
Descriptron Namespace
Descriptron Data Input Agents (linkers)
Build StatisticsDescriptron Build Statistics by species
Descriptron Build Statistics by type
Developer InformationDescriptron Error Codes
An Experimental Database Federation Ontology (pont,pins,pprj) for Protege
An Experimental Database Federation Ontology instances (rdf)
An Experimental Database Federation Ontology classes (rdfs)
An Experimental Database Federation Ontology (owl)
An Experimental Data Integration Ontology - Pufferfish (owl)
A Data Integration output example - tabbed (sis,erbB)
ftp_agent summary
Testers InformationOther Descriptron-like Systems relevant to Testing Goals
Manuscript DataHuman Adjacency Histogram
Mouse Adjacency Histogram
Other Identifier Test SuitesDtron random gene test suite for human identifiers
Dtron random gene test suite for mouse identifiers
Dtron random gene test suite for rat identifiers
Dtron random gene test suite for Drosophila identifiers
Dtron random gene test suite for C. elegans identifiers
Dtron random gene test suite for yeast identifiers
Example Path GraphsHs-534_s_at type level relaxed
Rn-rc_AI236863_at values colored nodes
Mm-139845_at values colored nodes
CC
MF
BP
BPValidate Aff1-H2Ob
Downloads
codebase

Research Interests:

I am interested in expanding computational methods for synthesizing facts from high throughput biochemical and genetic assays enlightened by our knowledge of (evolutionary) biology. I am also interested in computer based strategies for finding cures to viral disease, AI and general computational approaches that use public information sources to find critical linkages regarding the public health.


Some of my publications...

McGoldrick DJ, Hedgecock D, English LJ, et al. The transmission of microsatellite alleles in Australian and North American stocks of the Pacific oyster (Crassostrea gigas): Selection and null alleles. J SHELLFISH RES 19 (2): 779-788 DEC 2000

Ward RD, English LJ, McGoldrick DJ, et al. Genetic improvement of the Pacific oyster Crassostrea gigas (Thunberg) in Australia. AQUAC RES 31 (1): 35-44 JAN

Manchenko GP, McGoldrick DJ, Hedgecock D. Genetic basis of opine dehydrogenase activities in the Pacific oyster, Crassostrea gigas. COMP BIOCHEM PHYS B 121 (3): 251-255 NOV 1998

McGoldrick DJ, Hedgecock D. Fixation, segregation and linkage of allozyme loci in inbred families of the Pacific oyster Crassostrea gigas (Thunberg): Implications for the causes of inbreeding depression. GENETICS 146 (1): 321-334 MAY 1997

Hedgecock D, McGoldrick DJ, Manahan DT, et al. Quantitative and molecular genetic analyses of heterosis in bivalve mollusks. J EXP MAR BIOL ECOL 203 (1): 49-59 OCT 1

Hedgecock D, McGoldrick DJ, Bayne B.L. Hybrid vigor in Pacific oysters: An experimental approach using crosses among inbred lines. AQUACULTURE 137 (1-4): 285-298 DEC 1 1995


~ Contact information ~

Center for Computational Pharmacology
UCHSC at Fitzsimons
RC-1 South, Room L18-6400A
12801 East 17th Avenue
Aurora, CO 80010
phone: (303) 724-3369
cell: (303) 596 4522
email: Daniel.McGoldrick@uchsc.edu